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Primeur Weekly 22 August 2005
>Special
>US$150 million TeraGrid award heralds new era for scientific computing
>Indiana University gets $4.4 million from NSF for national Internet-based science tool
>TACC receives $10 million NSF award to make the TeraGrid more powerful, capable
>EuroFlash
>e-Science methods reveal new insights into antibiotic resistance
>Altair Engineering and Scali partner to deliver infrastructure and workload management tool
>Nottingham research sheds new light on how chemical reactions work
>Gathering of 53 SOA experts predicts huge uptake in service oriented architectures by end of decade
>Nallatech adds Third Wave Solutions to Channel Partner Programme
>Mercury Computer Systems forms alliance with inTrace GmbH
>Scali helps smooth management and installation of Lustre File System
>USFlash
>Argonne taps IBM Blue Gene for DOE INCITE programme
>NERSC launches Linux Networx supercomputer into production
>Server Virtualization popular Storage Virtualization not according to TheInfoPro report
>Datamail fast tracks major project by harnessing New Zealand Supercomputing Centre
>New Rice research system will feature a Cray XD1 supercomputer with 672 AMD Opteron cores
>GeneGo is awarded Phase II NIH grant for in silico assessment of drug metabolism and toxicity
>Univa closes US$8 million Series-A investment round
>Purdue University creates new Cyber Center
>ModViz announces Virtual Graphics Platform 1.3 with superscaling performance benefits
>New York University taps IBM supercomputer to help solve the mysteries of the sea
>Fluent releases FloWizard V2
>NERSC deploys the PathScale EKOPath Compiler Suite with new Linux Networx supercomputer cluster
>Imaging Solutions receives Technology Fast 50 Award for sustained high revenue growth over past five years
>Imaging Solutions complets 100th eCTD submission
>GigaSpaces receives funding from Intel Capital, bringing the total investment to $6 million
>CodeMesh announces beta version of JunC++Ion for Linux
New Rice research system will feature a Cray XD1 supercomputer with 672 AMD Opteron cores
Seattle 16 August 2005 Rice University in Houston, Texas, has chosen the Cray XD1 supercomputer to power its new research computing system. The 28-chassis machine is the largest Cray XD1 system purchased to date. Equipped with 336 Dual-Core AMD Opteron processors (672 cores), the supercomputer will be used by Rice researchers for studies that include computer science, biophysics, computational mathematics, earth sciences and cognitive neuroscience.
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Cray XD1 supercomputers are designed to take advantage of Dual-Core AMD Opteron processors. With two processor cores on a single die, the dual-core devices boost performance without requiring as much power, cooling or space as two single-core processors. In addition, Rice University will equip its Cray XD1 supercomputer with field-programmable gate arrays (FPGAs) to allow their researchers to explore possibilities for accelerating applications using reconfigurable computing techniques.

"Rice's research community is growing rapidly, and the users have demanded a system that will provide the processing power required to support a diverse set of compute-intensive challenges across both science and engineering”, stated Jan Odegard, executive director of Rice's Computer and Information Technology Institute (CITI). "After performing extensive application benchmarks, we chose the Cray XD1 supercomputer with Dual-Core AMD Opteron processors because it significantly outperformed competing systems when running several key applications.”

"The Cray XD1 system will also significantly reduce our total cost of operation due to its higher density, superior heat dissipation and lower power consumption", Jan Odegard stated. "The standards-based Linux operating system allows us to provide a common hardware and software platform that enables collaboration and resource sharing among our various research groups, resulting in greater efficiency and economy.”

The acquisition of the supercomputer was funded by a $2 million federal grant, one of the largest awarded under the National Science Foundation’s Major Research Infrastructure programme. The system will initially support 32 faculty investigators and 150 graduate and undergraduate students. CITI anticipates the supercomputer will eventually benefit any Rice faculty member whose research depends on large-scale computing. Projects currently scheduled to run on the system include models of flows in implanted blood pumps, studies of thermal convection in the Earth's mantle and computer-aided drug discovery.

The Cray XD1 supercomputer leverages Direct Connect Architecture, the AMD Opteron HyperTransport technology and innovative memory controller features to provide high-bandwidth, low-latency links between processors and memory. This high-speed interconnect significantly accelerates applications, allowing users to tackle larger problems and solve them more quickly.

"We're excited that Rice University has selected the Cray XD1 supercomputer as the centerpiece for its research computing programme”, stated Peter Ungaro, president and chief executive officer of Cray. "Rice has an excellent reputation around the world, and we are energized by the opportunity to build our largest Cray XD1 supercomputer for their very demanding scientific applications. We believe it provides further proof of the value of Cray's innovative research and development in providing some of the world’s most advanced computing systems.”

"We designed Dual-Core AMD Opteron processors to help our customers realize more computing power and efficiency”, stated Ben Williams, vice president of commercial business at AMD. "Cray's XD1 supercomputer takes full advantage of AMD's true dual-core technology and Direct Connect Architecture, providing customers with systems that excel at some of the most demanding applications in use today."

The Cray XD1 supercomputer combines direct-connect system architecture, high performance computing (HPC)-optimized Linux, management and reconfigurable computing technologies to deliver exceptional performance on real-world applications. Purpose-built for demanding HPC applications such as computational chemistry, environmental forecasting and computer-aided engineering, the Cray XD1 system lets users simulate, analyse and solve complex problems more quickly and accurately. The AMD64-based Cray XD1 system supports a broad range of 32- and 64-bit HPC applications on AMD Opteron single- or dual-core processors. The Cray XD1 system also provides application acceleration capabilities using FPGA technology tightly connected to the direct-connect structure.

The Rice research system will support an expanding community of researchers in fields as diverse as biotechnology, nanotechnology, psychology, earth sciences, fluid dynamics and computer science. Designed to support hundreds of users in the future, the system will initially be used for a series of memory-intensive applications sponsored by the National Science Foundation.

For example, bioinformatics researchers will use the system to leverage robotic motion-planning algorithms for computer-aided drug design. Earth scientists will model and simulate, with great detail, the deformation of sediments, soils and other materials near the earth's surface. Psychologists will use the system to better understand the structure and functions of the human brain and how they impact the development of speech, language, memory, perception and motor skills. Computer scientists will test new programming tools, compilers and system software for high-performance computers. And fluid dynamics researchers will use the supercomputer to model how heart pumps and other devices might aid blood flow.

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