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News digest May 2006
>Industry
  >HPCN industry
>Sandia-designed supercomputer ranked world's most efficient in two of six categories of HPCC Challenge benchmark
>Galicia to install Europe's highest capacity shared memory supercomputer
>Liquid Computing wins most promising start-up award
>IU to acquire United States' fastest university-owned supercomputer and largest disk-based storage facility
>Parasoft C++Test extends automated unit testing to the embedded systems environment
>Maplesoft teams with top French research centres
>Cray initiatives fuel rapid sales growth in Japan's high-performance computing market
>Scali strengthens Board of Directors with Fortune 50 executives
>SC06 Technical Programme is now seeking submissions
>2006 International Supercomputer Conference to offer tutorials on Blade Systems, Benchmarking Initiatives and HPC Software Tools
>Fujitsu Siemens Computers prepares new Services Division for take-off
>CommVault and Fujitsu Siemens announce certification of CentricStor for CommVault QiNetix software
>Fujitsu Siemens Computers PRIMERGY BX630 Blade server achieves world record in the MMB3 benchmark
>HP leads high-performance computing market for third consecutive year
>Sun and SAS announce Business Intelligence Software Support for Solaris 10 on x64 Platforms
>IBM launches open test drive of SOA-tuned DB2
>Power.org member Rapport achieves breakthrough in power efficiency
>Cluster Resources Inc. celebrates flagship product anniversaries
>Locuz extends its Infrastructure Management Services outside India
>HP simplifies management for Linux on blades
>Cray to delay filing of 2005 Form 10-K
>IBM launches new system x servers and software targeting large scale x86 virtualization
>Cray files 2005 Form 10-K consistent with preliminary results
  >The Grid
>NCSA and SDSC add compute systems to TeraGrid
>On-line storage - will the second wave succeed?
>Grid computing system for telecom carriers
>BBC Climate grid needs a restart
>Third International Conference on Grid Services Engineering and Management issues Call for Papers
>SETI@home looks for funding
>Sun has completed the acquisition of Aduva
>Metascheduling: a free study compiled by field experts, GridwiseTech
>Digging deep to unlock the Grid
>Launch of the Platform Alliance Network to enable virtualization of enterprise IT solutions
>Paremus announces availability of Infiniflow 2.1
>The Gridbus Project to release GridSim Toolkit 4.0
>Intel and Red Hat launch global solution acceleration programme
>UNICORE Summit 2006 introduces Call for Papers
>Enterprise Grid Alliance identifies data provisioning requirements to accelerate adoption of Enterprise Grid deployments
>First computational international effort to fight avian flu
>Crosswalk introduces iGrid storage
>Investment banks are using Grid computing deployments as the connective 'fabric' for shared enterprise IT infrastructure
>International speakers confirmed for Fourth Grid Summer School
>IBM expands business partner ecosystem for open standards-based Grid and Grow Programme
>Digipede joins the BioIT Alliance
>Oracle and Novell to offer Grid-ready solution for the data centre
>Voltaire Solutions available for integration through Sun customer ready systems programme
>Globus Toolkit 4.0.2 Now Available for Download
>GigaSpaces announces launch of Version 5 of its award-winning infrastructure product
>Callidus Software unveils Callidus On-Demand solutions for Enterprise Incentive Management
>Attunity expands its partnership with Oracle
>Oracle further extends Oracle Enterprise Manager with systems management support for IBM DB2 universal database
>Sun updates Sun Java Availability Suite and adds Sun Cluster Advanced Edition for Oracle Real Application Clusters deployments
>Strong industry adoption drives Oracle Fusion Middleware Q3FY06 growth
>Themis Computer's Quorum resource manager software wins Grid Technology Award at LinuxWorld 2006
>Interpolis drives competitive advantage with Informatica PowerCenter Advanced Edition
>Deutsche Post AG Mail Division standardizes on Informatica for data integration
>NEWS, but not as we know it
>HP introduces industry-specific service-oriented architectures
>Crosswalk partners with Bell Microproducts to improve its supply chain of storage components
>Univa launches enterprise software for Grid solutions
  >Applications
>Moores UCSD Cancer Center creates Bioinformatics Center
>An easy-to-use tool for automated control systems
>Rick Stevens named Argonne Associate Laboratory Director for Computing and Life Sciences
>Third International Conference on Mobile Computing and Ubiquitous Networking calls for participation
>SGI Technology powers award-winning cave at Seinäjoki University of Applied Sciences
>NASA achieves breakthrough in black hole simulation
>Galaxy simulation breaks new ground
>PSA Peugeot Citroën to take innovation to the next level with PLM solutions from IBM and Dassault Systèmes
>Avian flu modelled on supercomputer, explores vaccine and isolation options for thwarting a pandemic
>New video-conferencing method cheaper, more sophisticated, according to developers
  >Linux
>Linux Networx and SilverStorm Technologies announce contract to support five new Defense Department supercomputers
>Networking
>Collaboration spurs progress on networking technologies
>BELIEF, a new opportunity for eInfrastructure communities
>Landmark achievement for CSIRO wireless sensor network
>Rising to the challenge of managing bandwidth
>University of Idaho's boost in bandwidth opens world of opportunities for university as well as state
Sandia-designed supercomputer ranked world's most efficient in two of six categories of HPCC Challenge benchmark
Albuquerque 29 March 2006 In the High Performance Computing Challenge (HPCC) Sandia National Laboratories' Red Storm computer is the best in the world in two of six new categories, and very high in two other important categories. Red Storm had previously been judged 6th fastest in the world on the old but more commonly accepted Linpack test.
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The two first-place benchmarks measure the efficiency of keeping track of data - called random access memory, and of communicating data between processors. This is the equivalent of how well a good basketball team works its offense, rapidly passing the ball to score against an opponent.

Red Storm has already modelled how much explosive power it would take to destroy an asteroid targeting earth, how a raging fire would affect critical components in a variety of devices, and how changes in the composition of Earth's atmosphere affect it. These models are in addition to the basic stockpile calculations the machine is designed to address. Sandia is a National Nuclear Security Administration (NNSA) laboratory.

An unusual feature of Red Storm's architecture is that the computer can do both classified and unclassified work with the throw of a few switches. The transfer does not require any movement of discs and is secure. There are no hard drives in any Red Storm processing cabinets. A part or even the whole of the machine can be temporarily devoted to a science problem, and cross over to do national security work.

The capability of the machine to put its entire computing weight behind single large jobs enabled one Sandia researcher to get an entire year's worth of calculations done in a month.

Red Storm's architecture was designed by Sandia computer specialists Jim Tomkins and Bill Camp. The pair's work has helped Sandia partner Cray Inc. sell 15 copies of the supercomputer in various sizes to U.S. government agencies and universities, and customers in Canada, England, Switzerland, and Japan.

Cray holds licenses from Sandia to reproduce Red Storm architecture and some system software, according to Jim Tomkins. "The operating system was written here, but the IO [input-output] is Cray’s", he stated.

In the early 1990s, supercomputer manufacturers distinguished the capabilities of their products by announcing Theoretical Peak numbers. This figure represented how fast a computer with many chips in parallel circuits could run if all processors worked perfectly and in unison. The number was best considered a hopeful estimate.

Next came the Linpack benchmark, which provided a real but relatively simple series of algorithms for a supercomputer to solve. Since 1993, those interested in supercomputers watched for the new Linpack numbers, published every six months, to determine and rank the 500 fastest computers in the world. For several years, the fastest was the Sandia ASCI Red supercomputer.

Most recently, the limitations of this approach have encouraged the Linpack founders, in conjunction with supercomputer manufacturers, to develop still more realistic tests. These indicate how well supercomputers handle essential functions like the passing between processors of large amounts of data necessary to solve real-world problems.

It is in this revised series of tests, called the High Performance Computing Challenge (HPCC) test suite, that Sandia's Red Storm supercomputer, funded by NNSA's Advanced Simulation and Computing programme, has done extremely well.

"Suppose your computer is modelling a car crash", stated Sandia Computing and Network Services director Rob Leland, offering an example of a complicated problem. "You're doing calculations about when the windshield is going to break. And then the hood goes through it. This is a very discontinuous event. Out of the blue, something else enters the picture dramatically.

"This is the fundamental problem that Sandia solved in Red Storm: how to monitor what's coming at you in every stage of your calculations", he stated. "You need very good communications infrastructure, because the information is concise, very intense. You need a lot of bandwidth and low latency to be able to transmit a lot of information with minimum delays. And because the incoming information is very unpredictable, you have to be aware in every direction."

To David Womble, acting director of Computation, Computers, and Math at Sandia, "The question is (similar to) how much traffic can you move how fast through crowded city streets.” Red Storm, he stated, does so well because it has "a balance that doesn’t exist in other machines between communication bandwidth (the ability of a processor to get data it needs from anywhere in the machine quickly) and floating point computation (how fast each processor can do the additions, multiplications and other operations it needs to do in solving problems).”

More technically, Red Storm posted 1.8 TB/sec (1.8 trillion bytes per second) on one HPCC test: an interconnect bandwidth challenge called PTRANS, for parallel matrix transpose. This test, requiring repeated "reads", "stores", and communications among processors, is a measure of the total communication capacity of the internal interconnect. Sandia's achievement in this category represents 40 times more communications power per teraflop (trillion floating point operations per second) than the PTRANS result posted by IBM’s Blue Gene system that has more than 10 times as many processors.

Red Storm is the first computer to surpass the 1 terabyte-per-second (1 TB/sec) performance mark measuring communications among processors, a measure that indicates the capacity of the network to communicate when dealing with the most complex situations.

The "random access" benchmark checks performance in moving individual data rather than large arrays of data. Moving individual data quickly and well means that the computer can handle chaotic situations efficiently.

Red Storm also did very well in categories it did not win, finishing second in the world behind Blue Gene in fft ("Fast Fourier Transform", a method of transforming data into frequencies or logarithmic forms easier to work with); and third behind Purple and Blue Gene in the "streams" category (total memory bandwidth measurement). Higher memory bandwidth helps prevent processors from being starved for data.

The two remaining tests involve the effectiveness of individual chips, rather than overall computer design.

In a normalization of benchmarks, which involves dividing them by the Linpack speed, Jim Tomkins found that Red Storm had the best ratio. By this measurement, Red Storm - of all the supercomputers - was best balanced to do real work.

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